Insertion junction: CLIP2.061782_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061782
Chromosome:chromosome 12
Location:1759486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485950 (1 of 1) PTHR12480//PTHR12480:SF21 - PHOSPHATIDYLSERINE RECEPTOR // TRANSCRIPTION FACTOR JUMONJI, JMJC DOMAIN-CONTAINING PROTEIN 3'UTR
Cre12.g486000 (1 of 102) PF01753 - MYND finger (zf-MYND) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCATTGGTTACAAGCGGGACTGCTGACGCAGCGGGACTGCTGACACA
Internal bar code:TTGGCATTGGAGAGCTAATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1459
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGTTGACAGATGGGTGTG
Suggested primer 2:GATCAGCCCTTTTCCTGCCT