Insertion junction: CLIP2.061783_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061783
Chromosome:chromosome 10
Location:5937198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461000 (1 of 1) K14772 - U3 small nucleolar RNA-associated protein 20 (UTP20) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCTGGGAACTGTCCCCATGCGTGTCGTGTAACACAACTTGGCACCGC
Internal bar code:CGTTTGGTTTCTAATTAAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3091
LEAP-Seq percent confirming:83.8235
LEAP-Seq n confirming:114
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:136

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCTACCCATAGTCGCTC
Suggested primer 2:TTTGTGTGTGGTGGGGGTAC