Insertion junction: CLIP2.061783_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061783
Chromosome:chromosome 10
Location:5937204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461000 (1 of 1) K14772 - U3 small nucleolar RNA-associated protein 20 (UTP20) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAGAATGGAGAACACGCAGTGTCCTCCGCCTGCACAGTGCAGTTGCG
Internal bar code:CGCTACGTGGTTTTTGCCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2698
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGTGTGGTGGGGGTAC
Suggested primer 2:GTGCCTACCCATAGTCGCTC