Insertion junction: CLIP2.061785_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061785
Chromosome:chromosome 1
Location:3144210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g020050 (1 of 4) IPR000533 - Tropomyosin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATATTTTTGCCGCAAGCAGATGGCGAGTTGGTGATCGAGTTGATGAA
Internal bar code:AATATGAGTCAGACTTTCTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2435
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GGTATATGAGGAGCGGGTGC
Suggested primer 2:CAGTGCCGTACGTGTTTTGG