Insertion junction: CLIP2.061788_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061788
Chromosome:chromosome 11
Location:390546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467581 (1 of 1) PTHR10071:SF177 - GATA-LIKE TRANSCRIPTION FACTOR ELT-6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTTGGCTCCACCCGGCGCGCTGTGTGCCCGTCCCCGGGGCGATGAAC
Internal bar code:CGTATAAAGGCGGCCAGGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2319
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCTAGCTCCTTCTCCT
Suggested primer 2:CCCATGCAGCCAAACTATGC