Insertion junction: CLIP2.061797_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061797
Chromosome:chromosome 6
Location:5789310
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288950 (1 of 33) IPR013763 - Cyclin-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGACTCTTGATACGGTACATGCGATTGCAGGACTGTTTGTATGGAGA
Internal bar code:ATAACTCATTCCGCGTAAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1171
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTTGCTGACCATGCCACG
Suggested primer 2:TGTAGGGTAGGCCGTTAGCT