Insertion junction: CLIP2.061802_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061802
Chromosome:chromosome 7
Location:1118536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320550 FAE4 (1 of 3) K15397 - 3-ketoacyl-CoA synthase (KCS); Putative 3-keto-acyl-CoA synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACGAAGGTGGCCCGTTCTTGTGTTCGATTCAAGCTTGAGCTCGTCAG
Internal bar code:CCATCATCGTCTATAACTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2436
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAAGGAGCAGACGGACAC
Suggested primer 2:CGGCTTGTACACGTACAGGT