Insertion junction: CLIP2.061802_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061802
Chromosome:chromosome 13
Location:3843940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589400 PRL6 (1 of 14) PTHR10334 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED; Predicted extracellular protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTAGCATAATGGCTCGAGTGTTGGGCACCCTTGTCTTGTAGTGTCG
Internal bar code:ATACCAAGGGCTGAGGGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2363
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGTAACCTCTGTGCAT
Suggested primer 2:CAAGCCGCTCATTACCATGC