Insertion junction: CLIP2.061803_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061803
Chromosome:chromosome 6
Location:3663329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278146 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAAACTGGGGCCAAGCCCCGCCTCCTCACGCGCCGCTGCACATCACG
Internal bar code:ATTCCAGGGTTAGTTCAGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2104
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CACACTGCGGCAATATGAGC
Suggested primer 2:GCGTGATGCTGAGATTGCTG