Insertion junction: CLIP2.061805_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061805
Chromosome:chromosome 1
Location:7575913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g053150 GPDH3,GPD3 (1 of 3) K00006 - glycerol-3-phosphate dehydrogenase (NAD+) (GPD1); Glycerol-3-phosphate dehydrogenase/dihydroxyacetone-3-phosphate reductase 3'UTR
Cre01.g053200 (1 of 1) PTHR12415:SF0 - TYROSYL-DNA PHOSPHODIESTERASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCACCACAAAGCGGCGCATGCAGCTATCACTGTTTCTCAGTTGCATC
Internal bar code:GTAGTACGTCCTCCATCCCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1184
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCAGGATTGACTTGCTT
Suggested primer 2:GCTGTTGTTGTGGTGCAGAG