Insertion junction: CLIP2.061811_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061811
Chromosome:chromosome 6
Location:1675166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262300 CYN51 Cyclophilin 51; (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGACTCGAAAGGAGTAGGGCACGATACATGGGCGCTCCGGTGTCACTTT
Internal bar code:AAGGCACCTGAGCTTTAGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2081
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:140
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:140

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGTGTAGATCCACAACA
Suggested primer 2:GTGTGTTTGTGTGTACCGGC