Insertion junction: CLIP2.061814_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061814
Chromosome:chromosome 12
Location:685454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493000 (1 of 1) IPR006153//IPR020846 - Cation/H+ exchanger // Major facilitator superfamily domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATCGGCAACTGCAAGTGGCCGTGTTGGCCACGGCGTAGGCGGCCGGG
Internal bar code:GATTGAGCGAGAGATATAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2995
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCGTGCATATTGTGTGAC
Suggested primer 2:CACCCCATTCTCTGTGCCAT