Insertion junction: CLIP2.061817_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061817
Chromosome:chromosome 7
Location:5251409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349350 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCAAGTTGCCTCGGTGCACACGTAACCGTAGTTGATAGCCAAGCGTA
Internal bar code:TGGGTGGCTATCGATCAAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4448
LEAP-Seq percent confirming:97.1831
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGCTCCTAGGCGCGTTT
Suggested primer 2:GCCCCTGTCTTCTTGACTCC