Insertion junction: CLIP2.061818_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061818
Chromosome:chromosome 10
Location:5525319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458100 YEE1 Membrane protein; (1 of 3) K07112 - uncharacterized protein (K07112) outside_mRNA
Cre10.g458150 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGATCAGCTCGGTGTGATGCGCAATGCCACGTACACGCTGGTGATT
Internal bar code:AGGTTTCTGCAGCGGGGGCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3364
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGTAGCGTGGTCCGAG
Suggested primer 2:TGCAAGCACATGTTCATGGC