Insertion junction: CLIP2.061821_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061821
Chromosome:chromosome 9
Location:3500819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396289 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGATGTGGTGTGGGGGTGGGTGGAAGACGGTGTTAGGTGTGAAGCTCT
Internal bar code:TGGTACAAGGATCTGGTACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1284
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGAGGTGAAAAGGTCCG
Suggested primer 2:GTACACACACACACGCACAC