Insertion junction: CLIP2.061828_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061828
Chromosome:chromosome 10
Location:4911257
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453766 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAACCGCCAGCGACCTTAAGCAGCCATGGAGTCTGCTCTCAGCAAAC
Internal bar code:ATGTGGAAGGCGCCTAAGCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:6356
LEAP-Seq percent confirming:14.1243
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:152
LEAP-Seq n unique pos:177

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGAGTGCTGGTTCAAGGG
Suggested primer 2:TCGAAACCCATCAGGAACGG