Insertion junction: CLIP2.061833_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061833
Chromosome:chromosome 12
Location:3030361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCATGCATGCCTGAGCAGCGCCAAGGCTAGTGAACAGGTGAAGTTGTG
Internal bar code:GTCAATGGTTGGCAGCTGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2165
LEAP-Seq percent confirming:89.0909
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTCGTCATAGATGTGCG
Suggested primer 2:CGAGGTCGACATGGAGATGG