Insertion junction: CLIP2.061835_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061835
Chromosome:chromosome 13
Location:3244215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585600 (1 of 1) IPR011333//IPR019832 - POZ domain // Manganese/iron superoxide dismutase, C-terminal 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGACAAGTGAAGCTGATATTACAGCAGAAAACCCAAGCGTCAACCAG
Internal bar code:GCACTTGAATGGGTAGCTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:979
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTCCTTCAGCGTGTTCT
Suggested primer 2:CTAGGACGTGGACATGGACG