Insertion junction: CLIP2.061838_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061838
Chromosome:chromosome 8
Location:1144307
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362950 (1 of 3) IPR002202 - Hydroxymethylglutaryl-CoA reductase, class I/II 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCCGGCGGGCCCGCAAACGCGCGCTCTCTACACAATTTCCAGGACCG
Internal bar code:AGGGGAGCTCTATTTACTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5849
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGCTTCAGACACTCATT
Suggested primer 2:GGACGTTGTTTCCACACAGC