Insertion junction: CLIP2.061838_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061838
Chromosome:chromosome 8
Location:1144334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362950 (1 of 3) IPR002202 - Hydroxymethylglutaryl-CoA reductase, class I/II 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGTTGATCGCGCGGGATTCCGGCGATCTGCACTCTCCAACATCAACT
Internal bar code:AGGGGAGCTCTATTTACTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:940
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGACGTTGTTTCCACACAGC
Suggested primer 2:TGCCGCTTCAGACACTCATT