Insertion junction: CLIP2.061839_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061839
Chromosome:chromosome 8
Location:3450946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378500 (1 of 239) IPR016024 - Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGGATGCTCCCCCCCATGTGGATGCCCCGTATGCCCTCACAGCCCGC
Internal bar code:GTCCATCATGGACTGGGAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1761
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGGCGTCCTTTAACAAC
Suggested primer 2:CTCACACACAACAGCACAGC