Insertion junction: CLIP2.061846_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061846
Chromosome:chromosome 12
Location:2178559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509350 FAP238 Flagellar Associated Protein 238; (1 of 140) IPR002048 - EF-hand domain 5'UTR
Cre12.g509400 RIR2L,RIR3,RIR2B (1 of 2) K10808 - ribonucleoside-diphosphate reductase subunit M2 (RRM2); Ribonucleoside-diphosphate reductase R2-like subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATGATTGAATTAGTTGATACCGAGACAACTTAGGTGACGACCGCGGCC
Internal bar code:GTGGTTGCACTGGTTCGTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4829
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCTTGGCCTCGATCTCC
Suggested primer 2:TGCTGCTTCCGTCTTCTCTG