Insertion junction: CLIP2.061856_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061856
Chromosome:chromosome 2
Location:1805965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086887 NUP98-96,NUP189 Nucleoporin 98-96; (1 of 1) K14297 - nuclear pore complex protein Nup98-Nup96 (NUP98, ADAR2, NUP116) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCAGAGCTGACGAAGCTCTAGAGAGCTGATAGCCGGCGAACTAGACAA
Internal bar code:TTAGGACCGTCAGTGTGATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3103
LEAP-Seq percent confirming:98.5075
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTGATTCACTGGAGTCA
Suggested primer 2:GAGACAACCTGCGTCCAGAA