Insertion junction: CLIP2.061859_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061859
Chromosome:chromosome 10
Location:5778323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g460050 FLU1,FLU,FLP (1 of 1) PTHR10098//PTHR10098:SF123 - RAPSYN-RELATED // SUBFAMILY NOT NAMED; FLU protein, chloroplast precursor outside_mRNA
Cre10.g460100 (1 of 24) IPR001680//IPR017986//IPR020472 - WD40 repeat // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTACGACGCGGAATTGCCGTGGTGGATGTGCCTATTTCGCAATCATAA
Internal bar code:TACGGCATAAATTGTATAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:585
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCAGTGCATGGACGTTA
Suggested primer 2:AAAGAGATCCAGCTGTGGGC