Insertion junction: CLIP2.061860_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061860
Chromosome:chromosome 12
Location:4303068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGACTACATCGGAGACTACGGTATCTCTATGCCACACGAAGGTGGTTG
Internal bar code:TCAGCGGTGGTGATGATGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1702
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGCGCACGCATGACTAG
Suggested primer 2:TTAAGCTTTGCACCGCACAC