Insertion junction: CLIP2.061866_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061866
Chromosome:chromosome 12
Location:6369496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537200 OGD1 (1 of 1) 1.2.4.2 - Oxoglutarate dehydrogenase (succinyl-transferring) / Oxoglutarate dehydrogenase (lipoamide); 2-oxoglutarate dehydrogenase, E1 subunit gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGAAACCACACATGCCACGCAATGCGCGTCAGCAAAACATCGACACA
Internal bar code:GTGGGCCTTACGGACATAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1981
LEAP-Seq percent confirming:98.913
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGATACGGAGGGCGCAG
Suggested primer 2:TCATGTCTGCCAGGAAGCTG