Insertion junction: CLIP2.061879_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061879
Chromosome:chromosome 16
Location:7961824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691327 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTGACTGGCTGAGCCCCGACCCTGCCCCGCTGACCCTGGCCCTGCGC
Internal bar code:GTGATCGACCAGTAATATGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4093
LEAP-Seq percent confirming:31.3869
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:94
LEAP-Seq n unique pos:137

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGACAGTTCCCGTAACCC
Suggested primer 2:CATTACGACATGCGGCAGTG