Insertion junction: CLIP2.061880_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061880
Chromosome:chromosome 12
Location:1716921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801370 (1 of 34) IPR011010 - DNA breaking-rejoining enzyme, catalytic core 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTAGGCCAGCACCAGCTCAGGGGGCACGGCGGCCCACCTGCCGCAAAG
Internal bar code:GCAACCCTTGGCTGAGAGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2414
LEAP-Seq percent confirming:30.3704
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:94
LEAP-Seq n unique pos:135

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGTTTCGGCTACGCACA
Suggested primer 2:AGAGGAAGAGGCTAGGCACA