Insertion junction: CLIP2.061886_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061886
Chromosome:chromosome 11
Location:561898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467604 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACTTCGCTGCACAGCCGATTGCGGTGCAGATTTGCCAGGTTGAAGCAG
Internal bar code:TCACATACTGGTTGGACCAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1470
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTGCTGTGAGTCTCGGC
Suggested primer 2:CGCACTACTTGTAATGCCGC