Insertion junction: CLIP2.061886_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061886
Chromosome:chromosome 11
Location:561900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467604 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAAACCAAACATGGGATATGGACAGTAAAGAATATCAGGGGAGCCATA
Internal bar code:TCACATACTGGTTGGACCAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1592
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACTACTTGTAATGCCGC
Suggested primer 2:TTTCTGCTGTGAGTCTCGGC