Insertion junction: CLIP2.061889_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061889
Chromosome:chromosome 9
Location:5602893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409750 CAX2 (1 of 3) K07300 - Ca2+:H+ antiporter (chaA, CAX); CAX family cation antiporter, membrane protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAACACTGCAGCAGGAGAGTTTCCTGCCGCCGTGCCGCGCTGCCCTCA
Internal bar code:AGTGTGAAACGGAGATTGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1162
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAGTGTGATTCGACTGC
Suggested primer 2:GTGACGTTTTGGTTGTCCGG