Insertion junction: CLIP2.061898_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061898
Chromosome:chromosome 3
Location:5470879
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184450 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACGCTTTCAGTCTAGGAGGAAGACCCTCGCGCCCAGCTTTTCTACTCA
Internal bar code:CTCGAGTTCCAGTTTCTGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5160
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:159
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:159

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGTCCAATTTCCCTCCG
Suggested primer 2:AGCTTTCCCCTAGCTCGAGA