Insertion junction: CLIP2.061901_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061901
Chromosome:chromosome 10
Location:3267690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442800 UAPA1,XUV6 Xanthine/uracil/vitamin C permease-like; (1 of 4) PTHR11119//PTHR11119:SF36 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTACGGAATAGGCTTACAACCGTGCCACCCAACCCTTTGATTCCGCAG
Internal bar code:AACTATTATAGATTGAGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3704
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTCGTTATGCATGTGTG
Suggested primer 2:GGGCTGCTTTATGTGGTCCT