Insertion junction: CLIP2.061905_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061905
Chromosome:chromosome 7
Location:3841178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGGATTGCACTGGGGGTGTGGGATTTGCATTGATGACAATGATGCGT
Internal bar code:GGCGGTACCCGGCAAAGATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGCTATGTTCCTGGGCT
Suggested primer 2:CCAGCAGGACCACAGCATTA