Insertion junction: CLIP2.061906_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061906
Chromosome:chromosome 16
Location:7079389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g675076 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCCCCGCATTAACCTTTGGGCAGTCACGTCACCGGTAGGCCTGTAC
Internal bar code:TTGTGCAATTTTACACTCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1494
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTACGCGTATGAGAGCCG
Suggested primer 2:TCACACACATCGCGTACACA