Insertion junction: CLIP2.061913_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061913
Chromosome:chromosome 10
Location:551857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421350 MMP25 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGTGCAGCCGCCTCTTCTTGCCGCCCAACCGTCGCCACACTGAATG
Internal bar code:TTCGGTAGGGCCGTGAGCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GATTCCCGGCTGAGAGTAGC
Suggested primer 2:CCAACTGGACTGCTGACCAT