Insertion junction: CLIP2.061913_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061913
Chromosome:chromosome 10
Location:551858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421350 MMP25 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACACACCCGCCGATGACAGGACGGCACGTCCAGCATGGCAGTGTACG
Internal bar code:ATGTGACGGTATAAACATGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2014
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACTGGACTGCTGACCAT
Suggested primer 2:GATTCCCGGCTGAGAGTAGC