Insertion junction: CLIP2.061914_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061914
Chromosome:chromosome 9
Location:2369882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCAGCACGGCCCCAGCGAACGCCCCGCTTTATTGCGCCACGCGCCCA
Internal bar code:CTAAGTGTGTTTGACTAAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1679
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGCCTGTGTGTGTGATA
Suggested primer 2:AGAGAAACGTGTGGCGCATA