Insertion junction: CLIP2.061915_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061915
Chromosome:chromosome 17
Location:583861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699750 CTL2 (1 of 1) IPR016187//IPR024616 - C-type lectin fold // Pherophorin; Putative pherophorin with C-type lectin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTCAATCGTCGCGATCCTCGTGTGGCTGAAGCTGCAAGAGCAGGCGAA
Internal bar code:CTCGATCCACGCGGGTTCCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2853
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCTGCAAAGAAGGGTTG
Suggested primer 2:ATGCTTGGCGTTGTTGCAAT