Insertion junction: CLIP2.061922_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061922
Chromosome:chromosome 4
Location:3849510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230046 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTAAGGAAACAGTCGCGCGGCAAGGAGAACACCATGCAGGTTGCGTGT
Internal bar code:GATAAGCGCTCGTCCCTGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2791
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:177
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:177

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGTACTTGGGTACGTGG
Suggested primer 2:GAGGAGGAGGAGGGGGAAAT