Insertion junction: CLIP2.061925_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061925
Chromosome:chromosome 10
Location:2874920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439550 (1 of 4) PF07534 - TLD (TLD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAAAAGAAGTACGGTATGCCACGTGCATATGTGTGGACATTTGAAAC
Internal bar code:AGAGACACCAGGCTGCCCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1615
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTGCAGGTGCTACGGAA
Suggested primer 2:ACAGCGAGGACTTCAAGGTG