Insertion junction: CLIP2.061926_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061926
Chromosome:chromosome 4
Location:2790297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223850 DEH1,HEL23 (1 of 1) K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1); Cytoplasmic DExD/H-box RNA helicase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTTCCTTACCATATGCAGCTAACCCCGTCAATTGGCGCCCACAATTC
Internal bar code:ACACGAAGTAGCGGGGTAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2560
LEAP-Seq percent confirming:94.9153
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATCACCTACGACGACCG
Suggested primer 2:GGCTACGGACTGGAGCAAAT