Insertion junction: CLIP2.061932_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061932
Chromosome:chromosome 17
Location:2966792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802061 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTCGAATGCTGGGGTCTGGGCATGCGCGGCACACTACGCAAACCTGC
Internal bar code:TATACCAGTAGACCGATCACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:15650
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTTTCCGTGTGCTCTC
Suggested primer 2:CAGGCGTGTGTTGTTGAAGG