Insertion junction: CLIP2.061933_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061933
Chromosome:chromosome 2
Location:5391813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113700 (1 of 1) PF02151//PF08755 - UvrB/uvrC motif (UVR) // Hemimethylated DNA-binding protein YccV like (YccV-like) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACACGCCGCTGATCATGGCCGCCGACATGGCAACCTTGGTTGCCTT
Internal bar code:TGGTGACAAGCGCACGGCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1729
LEAP-Seq percent confirming:91.1392
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCTTTGACAGTTTTGA
Suggested primer 2:TAATGGGAGGTCAGGGAGGG