Insertion junction: CLIP2.061934_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061934
Chromosome:chromosome 17
Location:1288852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705300 PHC68 Putative pherophorin-chlamydomonas homolog; (1 of 6) 3.2.1.4 - Cellulase / Endoglucanase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGCGAGTTGGGCGCTGTATGACGGTTACGAAAACTGCAGGCGTGCCT
Internal bar code:ATCAGCTGTAGTTGAGATCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1709
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTCAAGACGGCAGATGG
Suggested primer 2:GAACTGGGTGTTTTGGACGC