Insertion junction: CLIP2.061935_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061935
Chromosome:chromosome 8
Location:207398
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g358553 (1 of 1) IPR000104//IPR001810//IPR006553 - Antifreeze protein, type I // F-box domain // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGGCGGCAGCACCACACGCCAGCGGGACGCCTCCACCAGCCCCGCCC
Internal bar code:CGAGAAAGTAGTTGAATAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:90
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCAAAATCGAGGGGAGGG
Suggested primer 2:CACACACACACACACACACG