Insertion junction: CLIP2.061937_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061937
Chromosome:chromosome 9
Location:6387454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATCACTGAGGGCACCAGACGTGACATTCCTGGTAGCCGCTCCCTAACC
Internal bar code:AAGCTCTTGCTGTCCGGGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1285
LEAP-Seq percent confirming:82.2581
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCCCAAAATTTTCGCGT
Suggested primer 2:CCTTTCCCAAAACTTCGGCG