Insertion junction: CLIP2.061937_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061937
Chromosome:chromosome 9
Location:6387460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGGAATGGCTACCTGGAATGTTACGTCAGGCTAGCACCCGGCGCTAT
Internal bar code:AAGCTCTTGCTGTCCGGGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2525
LEAP-Seq percent confirming:60.9756
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTCCCAAAACTTCGGCG
Suggested primer 2:CACCCCCAAAATTTTCGCGT