Insertion junction: CLIP2.061944_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061944
Chromosome:chromosome 11
Location:2153370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467740 (1 of 1) PTHR10108//PTHR10108:SF705 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAAATAAACACCTCATTTGTAGCGAAACACACAAGCACGCTCTTCTCT
Internal bar code:GCGGTAGTGAATAGTGTAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3654
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGTACACCTCCTGCAG
Suggested primer 2:GGGCTCGGCAAGTAGGAAAA