Insertion junction: CLIP2.061947_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061947
Chromosome:chromosome 10
Location:2496074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435900 (1 of 3) IPR001792 - Acylphosphatase-like domain 3'UTR
Cre10.g435950 OPR47 OctotricoPeptide Repeat protein 47 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCAAAATACTTGTGAGCAGCAACCTTCTTCGGCCTCCAGCCACCTAC
Internal bar code:GGCTGTTTTCAGTCATGCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TACAACGACCACCTGAACCG
Suggested primer 2:AAATTGTGGGCGGATCTCGT